Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921235.1_cds_XP_016470238.1_62711
CDS Infomation

[gene=LOC107792529] [db_xref=GeneID:107792529] [protein=F-box/LRR-repeat protein At4g29420] [protein_id=XP_016470238.1] [location=join(20123..20588,24123..25021)] [gbkey=CDS]
Sequence

ATGGATATGGATAACCTACCTCCCCCGTTAATCCTCGAAATCCTCAGCCGACTAGCTGAC
TCAACGGATCTAGCTCGTTGCCGAGTCGCGTCGAAAACCCTGAACGCACTCTCTCGCGAT
GTCCGATCCATCAATCTCTACTGCTCCTCCGATCGTTACACCAAGTCCCGATCTCCTGAA
ACCCGGGATTCCATTACACCCTTCAAGCGAATCTTCAATAAACTGATTTCTGAGTTGAGC
ATTGTGGAAGCCGTTTCCATTGGGGTCGATAAACCTTTCGGAAAGGTGTCTTACGGCGAT
GCGACACCGTTCGGAATTGCGAATGATTTGTACTTGACGGATGTTAATTTTGTTGCCCAC
TGGTTGCCTAAGGTTAACCAAAACTTGAGAGCTCTTTCCATATCGGACCTTTGGGTTCAG
TCTCGTTGGCAACGATCAAATGTCCTTGCTCTTATCTCTTCCTATTGCCCTCATCTTCTT
GAATTAGAGATTAAGAATTCTTGGCTGTCCGTGGATGGTTTGCTTCTGATGCCCAAGCTT
ACAACTTTGACACTGGAATTTATTACGTTGTATGATGAAAACCTAGACAAGGTGAACCAG
TGCTTCCCATATTTGCAAGTTTTGAATCTGATTGGGGTCGAAGGACTTAAAGAACCTAAG
ATTCATCTCGAGCACCTCAAACATTGTCATTGGACAGTGTCAAGCGGCCCACGTTATTTG
ACTATAGTTGCACCCAAACTTGTCCAACTCAACCTTCGTTGTGTGAAGCCAAAGATGCTT
GTTATTGATACCCCATCCCTGTCTTATCTACACCTCACTCTCCAGGGAGCACGCAGCCTC
AAAGTGCAAGAGTTTCACAACTTGGATACCCTGCATCTCGTGTCACCCGACCTTGGCAAC
CTGCTTTGCTCATTTCAATTTGGTAGAACCGTTAACAATTTAGTGTTGGGTGCAAAAAAT
CGAACAGAACTATTAGGACAGATAACATTTTGCTTTGAAATGCTGTTTGTTGAATTTCCT
AATGTTAAATCTATCACTGTAGCACCTCAAGTTTGGGCAGCGTTTCAGTGGAACTTTTCT
GTTGGTGATTTAGAATTAGAAGTGAGGACATATCCCAAGGGGTTGAAGGAGATTACTGCA
TATTTGATGATGCTTAATGTTGACATGACGTTAAAATTCATTTCCCATATAGTGAATAGT
TGCACTAGCTTATGTGACATGGCATTGTTTATTCCCCGTGGTCTTCGCTCTAATGATGCC
AGCGACTTCATAACAAAGTGCACTGCCCAATGTTCGAAGGTAAGGTTGAGATGGGGAACA
TGGAAAGAAGGAACAAAAGATGCCTGGATTATTGATGGCGTGTAG

Peptide Sequence

PEP ID

XP_016470238.1
PEP Infomation

PREDICTED: F-box/LRR-repeat protein At4g29420 [Nicotiana tabacum]
Sequence

MDMDNLPPPLILEILSRLADSTDLARCRVASKTLNALSRDVRSINLYCSSDRYTKSRSPE
TRDSITPFKRIFNKLISELSIVEAVSIGVDKPFGKVSYGDATPFGIANDLYLTDVNFVAH
WLPKVNQNLRALSISDLWVQSRWQRSNVLALISSYCPHLLELEIKNSWLSVDGLLLMPKL
TTLTLEFITLYDENLDKVNQCFPYLQVLNLIGVEGLKEPKIHLEHLKHCHWTVSSGPRYL
TIVAPKLVQLNLRCVKPKMLVIDTPSLSYLHLTLQGARSLKVQEFHNLDTLHLVSPDLGN
LLCSFQFGRTVNNLVLGAKNRTELLGQITFCFEMLFVEFPNVKSITVAPQVWAAFQWNFS
VGDLELEVRTYPKGLKEITAYLMMLNVDMTLKFISHIVNSCTSLCDMALFIPRGLRSNDA
SDFITKCTAQCSKVRLRWGTWKEGTKDAWIIDGV

Transcript Sequence

Gene sequence data has not been registered.